Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APIKVAGGVGNCEKDMQWCIDKTEFFTHGYIYERC----CYNMIMKKKCMCLFLKSPKLKIAARNVNNACGRGGLPKDAFSEFKC
1OQE Chain:K ((1-31))
-------------------------------PTPCVPAECFDLLVRHCVACGLLRTPRPKPA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1OQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6957 for 104 contacts (-66.9/contact) +
2D Compatibility (PS) -2465 + (NN) 2231 + (LL) 2332
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -7209.0 ( -69.32 by residue)
QMean score : 0.002
(partial model without unconserved sides chains):
PDB file :
Tito_1OQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OQE-query.scw
PDB file :
Tito_Scwrl_1OQE.pdb
: