Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YCKESLHLCMQHLKLNDRPTWLKCCDRLIIP-----------GPCMCKYIKDPV------QWKEAYRLMASCGKTVPLNQSLKSYFKCG
2ALG Chain:A ((10-80))
----SLAPCIPYVRGGGAVP-PACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPY-----------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27700 for 317 contacts (-87.4/contact) +
2D Compatibility (PS) -5237 + (NN) 1298 + (LL) 1024
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -32865.0 ( -103.68 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: