Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYTRLMIQVHSYVPFCAYTYDYFSYCLDFLTG---YYYKPG---KKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYTPPML----------ADKIQQLPLLCNTHLSFPISSSMDCSTV----------
1HSS Chain:A ((5-124))
-----MCYPGQAFQV-----PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS---------EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84072 for 551 contacts (-152.6/contact) +
2D Compatibility (PS) -8262 + (NN) -543 + (LL) 1584
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -93493.0 ( -169.68 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: