Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRNFLIWLLASLFYAYQYILRVIPNIIAPELITK-FNISIADIGQFGGLYYIGYTFAHIPVGFALDRFGPKFVLPIC---VVLTFVGTLPLIYFDE-WYYLTFSRIIVGVGSSASAIGIFKIASTYFSQ--KKSAKMASLSIIVGLLGAIYGGLPLNFLFNKFGWDYVIYAFSTFGCLLALLLFFITPNNSTEKN-V----SGN---VFQDLKTVLFNKHIILISFFSGLMVGPLEGFADGWAKAFLCEVY---QMTGDLASLLSSLIFIGMGAGSFFLAYFLERHPNRHYEAIIACSLAMIASFLLLFAQAGGLYVVLPTLLIIGFASGYQVI-AIYKAISYVDNSLVGLTTAVS-NMIIMVFGYFFHTGIAKIVDLCWDRTVIQGNPVYGSELLIKAISIIPICLLLAVFWFVWLKKRS |
| 2CFQ Chain:A ((25-375)) | ------------------------AYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVF-DQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNA--LLLAGTIMSVRII-GSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269315 for 2532 contacts (-106.4/contact) +
2D Compatibility (PS) -33224 + (NN) 2111 + (LL) 3868
1D Compatibility (HY) -17200 + (ID) 2050
Total energy: -315810.0 ( -124.73 by residue)
QMean score : 0.131
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