Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQLKKQLKQKLGV
1FYJ Chain:A ((14-48))
-------------------------DVVRELKAKKAP---KEDVDAAVKQLLSLKAEYKEKTGQ
General information:
TITO was launched using:
RESULT:
Template:
1FYJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9607 for 173 contacts (55.5/contact) +
2D Compatibility (PS) -3966 + (NN) -4143 + (LL) 2864
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 2212.0 ( 12.79 by residue)
QMean score : 0.678
(partial model without unconserved sides chains):
PDB file :
Tito_1FYJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FYJ-query.scw
PDB file :
Tito_Scwrl_1FYJ.pdb
: