Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MISSQIGSGIFMLPISLAPY-GTYSLISWAVSGLGAILLALVFALLCAKFPETGGPHVYVKHAFGP-TAAFFVGWTYWASSWVSSTAVIVASIGYLAPLFHNNI-QNIRLFLEIALILAIMLINLRGITTVGHVELLLMTVKITVLFAVPIAALLLFDRNNFVVSEEISNLTISQAFARSTLLTLWCFIGLEIVTASAGSVENPSKTIPRAIVFGTVFVAIIYFINSLAIMGLINGNHLA-NSKAPYADVIKIILPGNWYLIISIVAFIVSVSSLNAWFLADGQVALGLAKDKLMPQFFAKRN-KYGAPFCGIIINTLGILALLVLISSKNFAKQVTSIIDVSVVSFLFVYLTCCLAFLKVIIQ----EKNYYKFLIGGMAVLFCCWIIYETPMNTLLIASLFPLSGTPTYLLWYRKPTK----------- |
| 3GIA Chain:A ((3-435)) | LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYV---IPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLF---------NMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -459765 for 3609 contacts (-127.4/contact) +
2D Compatibility (PS) -40590 + (NN) -7747 + (LL) 1004
1D Compatibility (HY) -33200 + (ID) 4500
Total energy: -544798.0 ( -150.96 by residue)
QMean score : 0.386
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