Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYTQLFISVIALVISLFAGYKVVKHQPQSVLNIKVAIIDSDKVINESLALHNIQQQIKEQNSKLQQEFENELDKLKPSKEELELLSEEAKKERAEQFNKLALNARDNYTKKMSYLEESYRDAVD-----SVFNKIK--EVAKKTAEKNNIDLVLFISKKNQVLYSMNEIDLSDVVLKNINKEIPEFTLKGVN |
3ROH Chain:A ((171-256)) | ----------------------------------------------------------------------------------------------------IGGNGSFNYSKTISYTQKSYVSEVDKQNSKSVKWGVKANEFVTPDGKKSAHDRYLFVQSPNGPTGSAREYFAPD-------NQLPPLVQSGFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ROH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17792 for 361 contacts (49.3/contact) +
2D Compatibility (PS) -7809 + (NN) 4002 + (LL) 9880
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: 20215.0 ( 56.00 by residue)
QMean score : 0.039
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