Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKQYTFRIDNKDPLYKKLIKLPTAYYRLKHD----GNKHNIHSNNNVILEIGNNT--NGVKL-RWENDKIVLHKGSSALY--------------------------- |
| 4PE2 Chain:A ((3-498)) | IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNAAASNINKAKVASVESDYSSVKSAALSYYSDK--NTMPPSGELDALETYMDTLPDKADIGGGYKLLLVNNKLALKIGDGTAADSVTLTKAQIEKLLSDIGPKKIYTENTLKTELQKNSTLKDGTLYIVLIDN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10525 for 368 contacts (28.6/contact) +
2D Compatibility (PS) -7416 + (NN) -3308 + (LL) 128
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -4221.0 ( -11.47 by residue)
QMean score : 0.081
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