Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEKDSNFAMEKPGNNYVGCISSENGECKNFYDLKLNFVKYNSGNNSSLYPYYYNLENFGNFLEVDVKLRELIGLKKGLKD
2JRB Chain:A ((289-353))
--FSPETMKARRAWTDVIQTLREHKCQPRLLYPAKLSITIDGE------TKVFHDKTKFTQYLSTNPALQRII--------
General information:
TITO was launched using:
RESULT:
Template:
2JRB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17955 for 412 contacts (-43.6/contact) +
2D Compatibility (PS) -6461 + (NN) 3811 + (LL) 224
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -22731.0 ( -55.17 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_2JRB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JRB-query.scw
PDB file :
Tito_Scwrl_2JRB.pdb
: