Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSPAIFSIGPVSIHWYSLAYVLGIVFAYWHLHKLDEQKIFTKNFYDSLLTATIIGIILGGRLGFVLIYDPISYINNPIEILKTWKGGMSFHGGAIGVLCAVIISCRRYNIPIFYTLDLISCGVPIGLFLGRIGNFVNGELFGRVTTMPWGMVFPESGDNLLRHPSQLYEAFFEGLLFFAIANSLFFLTRIRLYHGTLTGIAVIWYGTVRFVVEFFREPDYQVGYLWLDLTMGQLLSIFMTLLGIIVYLSALNSKFNTKSVA |
| 1G2C Chain:B ((480-519)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------PLVFPSDEFDASISQVNEKINQSLAFIRKSDELLHNVNAG-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6517 for 140 contacts (-46.5/contact) +
2D Compatibility (PS) -4399 + (NN) -3747 + (LL) 16204
1D Compatibility (HY) 1200 + (ID) 400
Total energy: 2341.0 ( 16.72 by residue)
QMean score : -0.264
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