Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEELLNEIPLLEDKAVFEIESASSLQDLEKVRLSYLGRKGVIKAYFDDLRKVEDTEKKRDLGAIINVLRNKLDQLIMNKESILKAEEVNFKLQNEAIDITLPVRPEKIGRAHPLSKVMNEVKLIFAHMGFRAVNGPDIEDEFHVFDALNTPSHHPAREEQDTFYLKNKI----------NDKRMMLRTHTSSMQIRAMKKAKTFPIKIVAAGRVYR-NDFDATHTPMFHQMEGLYVNENVNMGQLKFTIHHFLNKFFGDKELKIRFRNSFFPFTEPSAEVDISYKE-SKWIEVLGCGIVHPNVFQNV-------GID--HTKYSGFAFGIGIERLAMLKYQISDLRNFYDNKISWLSHYGFHFSSLR |
| 2ALY Chain:A ((2-262)) | -------------------------------------------------------------------------------------------------VDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYM-VAHTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFGPDS-KVRFQPVYFPFVEPGAQFAVWWPEGGKWLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQFKGVL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ALY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117636 for 1835 contacts (-64.1/contact) +
2D Compatibility (PS) -24651 + (NN) -1193 + (LL) 8536
1D Compatibility (HY) -25600 + (ID) 5550
Total energy: -166094.0 ( -90.51 by residue)
QMean score : 0.502
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