Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNNIIESFGRDQLENF--INYKNKIGIGALDIALNSGNKKAIEVLKSYGADIENR-VDGESRLLRALKEGNIEKMELLLS
4GMR Chain:A ((21-91))
-----------KDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLS
General information:
TITO was launched using:
RESULT:
Template:
4GMR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -689 for 488 contacts (-1.4/contact) +
2D Compatibility (PS) -7780 + (NN) -5498 + (LL) 436
1D Compatibility (HY) -400 + (ID) 1250
Total energy: -15181.0 ( -31.11 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_4GMR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GMR-query.scw
PDB file :
Tito_Scwrl_4GMR.pdb
: