Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILRNLLFLLPPEIAHSLAIM-----MLKRISYRKPIELPESLSVNCFNNKFRSPVGLAAGFDKNAEVIRSMLSFGFGFIEAGTVTKHPQYGNAKPRIFRLIEDQGVINRLGFNNKGIDYF-----LKQISETKL--DDCILGINIGKNSASKDQVSDYIDLIKMVYGKSSYIVLNISSPNTPNLRNLHNRQELSELLKSITLTRKSIDNSESVPIMLKISPDIDQQTKEDIAGLALEYKIDGLTISNTTVSRDN--LHSHHNESGGLSGRPLFKLSTELLSDIYKLTQGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPRAVNKINLELAELVRKDGLSNIGEAVGCDCRF |
| 4LS2 Chain:A ((36-389)) | -LMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDS----DMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LS2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158188 for 3105 contacts (-50.9/contact) +
2D Compatibility (PS) -36876 + (NN) -20823 + (LL) 552
1D Compatibility (HY) -28400 + (ID) 7800
Total energy: -251535.0 ( -81.01 by residue)
QMean score : 0.531
|
|
|