Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------MTDKKDNAKANSGKIMYPNFFEIDFIINEKEIDCNVTRM-LIEKAKKGHKFGETWEDYYRSISDNKRISI-YKNV---------------------------------------------------- |
| 1V0A Chain:A ((3-175)) | SAVGEKMLDDFEGVLNWGSYSGEGAKVSTKIVSGKTGNGMEVSYTGTTDGYWGTVYSLPDGD-------WSKWLKISFDIKSVA---NEIRFMIAEKSINGVGDGEHWVYSITPDSSWKTIEIPFSSFRRRLDYQPPGQDMSGTLDLDNIDSIHFMYANNKSGKFVVDNIKLIGALEHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2600 for 280 contacts (-9.3/contact) +
2D Compatibility (PS) -6522 + (NN) 532 + (LL) 524
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -11616.0 ( -41.49 by residue)
QMean score : 0.285
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