Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFIDEVKLYLKAGDGGDGCVSFRREKFVEFGGPNGGNGGKGGNIVFVSDANLNTLLNFRYRRHVKAGSGKSGASRDRSGTAGKNIVLKVPVGTQIIDEESEKIILDFNKPDMEFLIAQGGKGGLGNTNFKSSINRAPRHFTCGQFGEEKYVVLKLKVLSDVGIIGMPNAGKSKFL-----TRCSNADTKVGDYPFTTIKPHLGVAKVDN-SEVVIVDIPGIITDAHLGIGLGHKFL----KHVERCKILLHLIDVTHDNVVSAYNCMRNELELYNSDLVKKEEIIVLNKCDLLRKVEIFEKKNHLANYLNKEVLCLSIGEDLQPILRLLNEKLKKGSSKKVDVYDPFKR |
3IEV Chain:A ((13-133)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------VAIVGKPNVGKSTLLNNLLGTKVSIISPKAG----TTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDV-LGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLN-----KPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50683 for 745 contacts (-68.0/contact) +
2D Compatibility (PS) -11677 + (NN) -794 + (LL) 6404
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -67900.0 ( -91.14 by residue)
QMean score : 0.502
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