Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELAVGNNAPDFSLPTDSGENLSLSDFF--DKKNIVLYFYPKDDTPGCTLEAKGFRDKINDFSSLDTVIIGASRDSIKCHASFKA------KYSLPFYLISDENAKMLEKYGVWVEKSMFGKKYMGIERTTFLIDKKDKI-VRIWENVKVSGHVNEVLEAVKKI
3A5W Chain:A ((8-161))
----IGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGL-----LH---ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL
General information:
TITO was launched using:
RESULT:
Template:
3A5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73738 for 1058 contacts (-69.7/contact) +
2D Compatibility (PS) -15284 + (NN) -7370 + (LL) 1180
1D Compatibility (HY) -11200 + (ID) 2100
Total energy: -108512.0 ( -102.56 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3A5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A5W-query.scw
PDB file :
Tito_Scwrl_3A5W.pdb
: