Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAERANDIRPGQVLEHNGGLFLVVSIMHTQPGK-GGAYIQAEMKNIKTGAKLYERFRSDATIRRAILDEEEYIYLFTEGNIVNLMHPSNYEQITINLDLLEEK-KIYLQDNMRIKVVTYQDKIIFAHVPDYVRLTVKETESFIKGQTITSSYKPAVLENGMRINVPQFIKEEDKIVVYTPDDSYYERVKE |
1BKB Chain:A ((10-136)) | KYVEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEVPIIEKFTAQILSVSGDVIQLMDMRDYKTIEVPMKYVEEEAKGRLAPGAEVEVWQILDRYKIIRVKG------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22350 for 806 contacts (-27.7/contact) +
2D Compatibility (PS) -12327 + (NN) 4042 + (LL) 4080
1D Compatibility (HY) 0 + (ID) 950
Total energy: -27505.0 ( -34.13 by residue)
QMean score : 0.200
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