Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRQSGASETKGFYLSGRYYSRFFASMGKLKLRSEDVNYRIATDFWNDGRDTPEELYHLDKHS
4RIQ Chain:C ((2-25))
-------------------------AMGSVEHTLADVLYHVETEVENLY--------------
General information:
TITO was launched using:
RESULT:
Template:
4RIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3644 for 87 contacts (41.9/contact) +
2D Compatibility (PS) -2691 + (NN) -1565 + (LL) 1964
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -598.0 ( -6.87 by residue)
QMean score : -0.147
(partial model without unconserved sides chains):
PDB file :
Tito_4RIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RIQ-query.scw
PDB file :
Tito_Scwrl_4RIQ.pdb
: