Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPISIKETNADQLP----NEKGTRYKENKEYFYTSLKNEAIGVVITGLFITAAVMVPSVVGAVIYGIIAVLVVITTILHAIISTLSSYREMEENKVEHVNSQAIKI
2K05 Chain:B ((101-138))
MEGISITSDNTEEMGSGDDSMKEPAFREENANFNK------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K05.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1623 for 68 contacts (23.9/contact) +
2D Compatibility (PS) -3077 + (NN) -495 + (LL) 7416
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 3467.0 ( 50.99 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_2K05.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K05-query.scw
PDB file :
Tito_Scwrl_2K05.pdb
: