Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISVLGSTGSIGKKTVDLLLKRKEEYQVEALSTCSNFALLACQAKLLNARYVAISNKRFYKDLKESLLGTGIKVEVGTEGLMNV-ASLPVDLSVVAVVGIAGLEPVMHVIESGTKVIALANKESIVCGGKLLLKKTEEKNVQIVPIDSEHNAIFQVLQNGNKCVEKIILTASGGSFLNYSLEQLRNVTVGQALSHPTWNMGKKISVDSATMMNKALEIIEAHNLFNISPNRIEAIVHPESIIHGIVIYKDGFNFAVLAEADMAIPISYALSWPERSALSYKLDLTKQKLTFQEPDHKRFPALKLSMEVLNSSSPHTNSIVLNAANEVAVDKFLKSRIDFLEIIKVVKLTVENFDSYTDINSLSDIINIDLESRAIAKEIIKNKVLAYS |
| 3A06 Chain:A ((4-360)) | -RTLVILGATGSIGTQTLDVL-KKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFED-------SSINVWKGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEH-SKRVCLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVMEPE---VEKVVLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVKIHREGLVHGAVVLPDGNVKMVVSPPDMRIPISYALFYPRRVALE-PFFLRTISLSFEDPDPEKYPAFFLLKEIKDSYALRT---AFNAADEVAVEAFLKGRIRFGGIHRVIEKTLEEFQGYPQPRTLDDVERIHFEAIKKAERVTEWLS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226917 for 3065 contacts (-74.0/contact) +
2D Compatibility (PS) -38050 + (NN) -9329 + (LL) 1528
1D Compatibility (HY) -30800 + (ID) 7400
Total energy: -310968.0 ( -101.46 by residue)
QMean score : 0.442
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