Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSGNVLLTFCSNSGYLRSDMNAVKNLVIWLLIIVITAMFIDSQKDRLRNRFLSTFLPYRGRIQDSRSVEFTKSYDGHFYIQAQVNGHNITFLLDTGATDIVLSQKDALYAGIKLQDIQDFKIYETAKGQIRAGVVQIPQIKIGNFLINDVQASVNTHSMPHSLLGMSFLKYFHFTIRGNKLILYCNSTY
3EC0 Chain:A ((11-97))
--------------------------------------------------------------------------------VTAYIEGQPVEVLLDTGA-------DDSIVAGIELGNNYSPKIVGGIGGFINTKEYKNVEIEVLN---KKVRATIMTGDTPINIFGRNILTALGMSLNL-----------
General information:
TITO was launched using:
RESULT:
Template:
3EC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54733 for 627 contacts (-87.3/contact) +
2D Compatibility (PS) -9071 + (NN) 1493 + (LL) 7392
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -63369.0 ( -101.07 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_3EC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EC0-query.scw
PDB file :
Tito_Scwrl_3EC0.pdb
: