Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIYDKSN----YLLVAAAETLE-KDLFNQYGLISGKIYVILPSSKVTCISQNVEH--------------------------SSKRLLI---------NNFDELFHLVNCSKED---------H-----------TK---ELQRSKAIDECAITLLKSSELLPYALVVDVNFKD-----EYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYRTCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
| 1SNN Chain:A ((2-220)) | --------NNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQKFKVLRELYPNDIPYDEKSSFSITINHRKTFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVKNRQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINYY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101725 for 1191 contacts (-85.4/contact) +
2D Compatibility (PS) -16486 + (NN) -6981 + (LL) 13176
1D Compatibility (HY) -5600 + (ID) 1550
Total energy: -119166.0 ( -100.06 by residue)
QMean score : 0.396
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