Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDGACSGNPGTGGWAAIILFQDYRKDVYGREENTTSNKMELTAVINGLKALKFSCNINLYTDSLYVKSGITEWVSKWKVNGWKTSSKRSVKNIELWKELDNIASQHKINWKWVKAHNGDKHNEEANNLARKAIIDA
3AA5 Chain:X ((10-144))
-DGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAFIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNP
General information:
TITO was launched using:
RESULT:
Template:
3AA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18353 for 996 contacts (-18.4/contact) +
2D Compatibility (PS) -14626 + (NN) -6024 + (LL) 208
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -51595.0 ( -51.80 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_3AA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AA5-query.scw
PDB file :
Tito_Scwrl_3AA5.pdb
: