Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQKNTLLEVADNSGAREVLCIGLLGG--------------RKSASIGDTIVVSTKSVNPKGKVEKGKVYRAVVVRVKNCIRKSDNSVIRFSSNAVVLVNNQGEPLGTRVFGPV-KKLPSGSFMKIMSLAVEVL
2ZJQ Chain:H ((1-134))
MIMPQSRLDVADNSGAREIMCIRVLNSGIGGKGLTTGGGGNKRYAHVGDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRGTRVFGPVARELRDRRFMKIVSLAPEVL
General information:
TITO was launched using:
RESULT:
Template:
2ZJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86221 for 964 contacts (-89.4/contact) +
2D Compatibility (PS) -13298 + (NN) -7183 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 3300
Total energy: -120802.0 ( -125.31 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJQ-query.scw
PDB file :
Tito_Scwrl_2ZJQ.pdb
: