Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPKHYPDTISSPDFSSLEKEIIKFWQENKIFEQSV-EKRSKDNCFVFYDGPPFANGLPHYGHLLTGFIKDAFARYQTMLQKKVERRFGWDCHGLPAEMGAEKELGISGRTEIEKFGIEKFNNYCRTSVMKFSSEWEKYVNRQARWVDFHNDY-KTMDRSFMESVIWA---FKQLYDKGLVYESVRVVPYSWACETPLSNFETRLDTAYRKKT-----SKAVTVAFELLENPQQFKQKCKLLAWTTTPWTLPSN-LALAIGKDIEYCAVSVHSSVSFQHVTLESREKETWIPLSRTG-MTEEGTETVTEDNEVSLVNNEIYIFAEDYLEKFIGHCEQNNIPYENCNTKLKADDLAGLSYKPLFNYFKG----TKNAFRVFIADYVTGEDGTGVVHTAPGFGEEDFYLCQSHDI---PAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKLKEQGNWFKTEQYIHNYPHCWRTDTPLIYRAMPSWYVAVTKFKERMIELNKRVNWIPTHIRDGQFGKWLERAHDWSISRNRFWGTPIPIWKSDNARYPRVDVYGSIAELERDFNVKVNDLHRPFIDSLTRPNPDDPT-GKSIMRRVP-----DVFDCWFESGSVPFAQVHYPFENKEWFESN-----FPADFITEYIAQTR------GWFYTLFVLSTALFDSEPFKNCICHGVVL-------------------------DVKGQ------------------KLSKRLNNYADPMEVFDKYGSDALRFLMLSGSIVCGGNLFLNKEGSSIRDVLKNVMKPIWNSYHFFTMYANADGIKAEVCKDYKSTIDSYMIFKCFEAVESIQASMSNYNSQEACKILIDFFEVLNNWYIRRSRERFWKSNLDQDKTDAYNVLYTVFYYILRAAVPLLPLITETIWQGLKYKEISVHLADFPQLERYDSELIAKMDLVREICNSALSIRNTFNIRVRQPLGSMTVYHQSSCSFLESKPLSVVIPKFSPVIPMRDTGTQKEKKWSNAEMKTSMNEYQEMIKDEVNVKELKLVNSLEGIASLELKLNFPMLGKRIPDKVKKLVQYVKEGKWKQVDNEQVFLGNESESYIIEKDEYELLLKTNSEYSSVFGDNKGIVILNTALDDALVLEGLARDVVRLIQEARKQADFHISDRIRVIIKTEDEKIKRAINTWGEYIREQTLSLSLEINIEIGDNFYSKEYQDLIVGIELNC |
| 3ZJV Chain:A ((30-797)) | -----------------IESKVQLHWDEKRTFEVTEDESKEKYYCLSML---PYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVK------------------NN---TAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAV------------------------EIPQWFIKITAYADELLNDLD------KLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNPE------------------LAAFIDECR---------N---------TMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGS-----------------EPDLSQQALTEKGVLFNSGEF-----------NGLDHEAA---FNAIADKLTAMGVGERKVNY---------------RLRDWGVSRQRYWGAPIPMVTLED---------GTVMPTPDD-QLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMES-SWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFAS---PADMTLEWQESGVEGA-NRFLKRVWKLVYEHTAKGDVAALNVDALTENQKAL-RRDVHKTIAKVTDDIGRRQTFNTAIAA-----IMELMN---------KLAKAPTDGEQDRA--LMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYVIYVPGKLLNLVVG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228176 for 5146 contacts (-44.3/contact) +
2D Compatibility (PS) -68091 + (NN) -12394 + (LL) 26640
1D Compatibility (HY) -29600 + (ID) 9150
Total energy: -320771.0 ( -62.33 by residue)
QMean score : 0.256
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