Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKYIVFVLSYILGSIPFSLVITKIKGINLREVGSGNIGATNVARTGSKCIAALALLLDSLKGFIAV------YIAKQFFDDGSFHMYASAILVVLGHMFPVWLKFSGGKGV--ATTLGILIALNISLVLAFVFVWLAVFFAFRYSSLASLTSTIAAVLSSFFFQRDLFFTLLTVAILIFFKHYRNIVNLLQGRERKFS
2HG6 Chain:A ((1-106))
----------------------------------------------MSITSTDICQAADALKGFVGFNRKTGRYIVR--FSEDSFGMDVADDSITPTSEF-VWSSVRDDVMRLGREQLQILLEQNINERL---NIGEPLLVYLRRQDLPEITAQRQLR-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101312 for 618 contacts (-163.9/contact) +
2D Compatibility (PS) -10039 + (NN) 2257 + (LL) 8068
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -104626.0 ( -169.30 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_2HG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HG6-query.scw
PDB file :
Tito_Scwrl_2HG6.pdb
: