Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSDDKEERLLSEKHKSNPSMAVKWQRNIFTKT--ESQSSSKLYLVDLAKKSHKIISTPTSAYLPDWSHF-
2JT1 Chain:A ((1-71))
MSESIVTKIISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVNAGKGVPGLWRLLE
General information:
TITO was launched using:
RESULT:
Template:
2JT1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 22548 for 439 contacts (51.4/contact) +
2D Compatibility (PS) -6943 + (NN) -1236 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 12769.0 ( 29.09 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_2JT1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JT1-query.scw
PDB file :
Tito_Scwrl_2JT1.pdb
: