Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKL-NQ-PIALAQKVSVDDCNFTSKEDVVINLNEMDIIFIRQDPPFDMRYITTTYILEKTRALVI-NNPTEMRNCPEKLITSLFP----ELIPPTLITENISMIRDFYHDYR-GIILKPLYSYGGNDVIRIQNENSIQVVVELMIT-----KYKCPVIAQAFCKNVNKDKRILLLDGQPIGV-MKRV-PRV-SGEIRTNLRLGASFEPVE-MND-----RDNEICNKIGPELKKRG---LIFVGIDIVDD----FLLEINITSPTGV-VYINKLYNTSLEKDLWNTFEEKASSHISQPSL |
| 2YRX Chain:A ((34-338)) | -----------HAIAWKAAQSPLVGKLYVAPGNPGIADVAELVHIDELD---IEALVQ-----FAKQQAIDLTIVGPEAPL---ASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSYEEAKAYIEQKGAPIVIKAD----GKGVTVAQTVEEALAAAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQDHKRAYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANGPKVIEFNARFGDPEAQVVLPRLKTDLVEAVLAVMDGKELELEWTDEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119709 for 2006 contacts (-59.7/contact) +
2D Compatibility (PS) -28209 + (NN) 371 + (LL) 1372
1D Compatibility (HY) -400 + (ID) 1500
Total energy: -148075.0 ( -73.82 by residue)
QMean score : 0.265
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