Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHFVTDKCIKCKYTDCVEVCPVDCFYEGKNMLVINPDECIDCGVCIPECPVDAIVTDDSIKDILELDEELLSNEQKTFKSFYNINIEYSQKWPNITAKKQPLHTAEKYKEKKDKTAYFNENLE
1G3O Chain:A ((4-104))
----VTDNCIKCKYTDCVEECPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVP--------------EDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHLER---
General information:
TITO was launched using:
RESULT:
Template:
1G3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52619 for 730 contacts (-72.1/contact) +
2D Compatibility (PS) -10259 + (NN) -3974 + (LL) 1564
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -80188.0 ( -109.85 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_1G3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3O-query.scw
PDB file :
Tito_Scwrl_1G3O.pdb
: