Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYIQILPETFSIISSLVLLLLGIVFNRRTINLLALGCTVITLIILILSAKDSGFFPFNSLLKLDLYIRSAQGLILIAGILVLLLLNLSKYDYEYEFSILILFTLFGMITLVSANNLISFYLSFELMSIPLYVLASFNKDSVYSCEAGVKYFTL-SALSSCIMLYGMSLLYGYTGLVNFSELSSFLENHQMTYGIVFGLVLILIGLCFKLAIAPFHMWAPDVYQGAPTIVTAFFSTVPKAALVTFLIRFFMGEELVGVEKYFQPVLLYISALSVL-ISAFGALRQRNLKRLLAYSSIGHIGFILASLSIFTRMGTDSSLIYLVIYIITNIGLFSYFIQIDDDDCSVANLSGIGKKRPVLAFHLSILLFSMAGIPPLAGFFAKLFIFKSLVNSGFIGMSLIFIVASVISCYYYL----SIIKAMYFDKPSDSKVIYSKSLFIVTSVASLINIVLFMCVEDLYSLIHLVTKSL----- |
| 4JS1 Chain:A ((1-318)) | --------------------------------------------------------PEASFQVWNKDSSSKN-------LIPRLQKIWKNYLSMNKYKVS--YKGPGPGIKFSAEALRCHLRDHVNVSMVEVTDFPFNTSEWEGYLPKESIRTKAGPWGRCAVVSSAGSLKS-------SQLGREIDDHD---------------AVLRFNGAPTANFQQDV--GTKT-----------------TIRLMNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHS----DIPKWYQNPDYN----FFNNYKTYRKLHPNQPFYIL---------------------------------KPQMPWELWDILQEISPEE----------IQPNPPSSGMLGIIIMMTLCDQVDIYEFLPSKRKTDVCYYYQKFFDSACTMG-AYHPLLYEKNLVKHLNQGTDEDIYLLGKATLPGFRTIHC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -395483 for 2514 contacts (-157.3/contact) +
2D Compatibility (PS) -31151 + (NN) 4253 + (LL) 14012
1D Compatibility (HY) -6400 + (ID) 2450
Total energy: -417219.0 ( -165.96 by residue)
QMean score : 0.303
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