Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKALITCFIFLVCSFTRSYASDDVHLEKSETELYEEAVELFDQKKYKQAIRAFRKIEDLYP-FSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRVLSYYMQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVRLITDHILKKEYSIGKFYFRRGEYLAAIKRFQNII-SSKDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAENLKENTVEQ |
1XNF Chain:A ((7-177)) | --------------------------------KSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM---PEVFNYLGIYLTQAG--------NFDAAYEAFDSVLELDPTYN-----------------YAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP---FRSLWLYLAE-QKLDEKQAKEVLKQHFEKSDKEQWGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61608 for 1207 contacts (-51.0/contact) +
2D Compatibility (PS) -18176 + (NN) -7345 + (LL) 5732
1D Compatibility (HY) 3600 + (ID) 1050
Total energy: -78847.0 ( -65.32 by residue)
QMean score : 0.354
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