Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLRKNLITSESVAAGHPDKVADQISDAVLDEYLLTDPFSRTAIETLVTKDNVIIAGEVFGPNVANSTIENVVRNTIKDIGY--EHDGFHWGEVGVNMLLHEQSNDIAIGV-------DQGAGDQGIMYGYATIETKSLMPAPIFYAHSI--------LKNVMSVVKEAKLGPDAKSQITLAYESN----LPVRAESIIVSIQHPEDLDQLKVKEIIYPYVVSSL-PKGWMCAEENFFVNPTGRFVIGGPVSDCGLTGRKIMVDTYGGYIPHGGGAFSGKDATKVDRSAAYMARYLAKNIVFANLAERCLVQLSYAIGVSKPTSFYIDTFGTNK--VDEERIKKLIESNIDLSTRGIIKHLSLSRPIYKRTACYGHFGKESEEDDGFSWENLNLSLDLSREFSVQSNRKVSLDC |
| 4ODJ Chain:A ((32-409)) | ------LFSSESVCSGHPDKLCDQISDAILDACLEQDPESFVACETCTKTGFIMVFGEI--TTKANVNYERVVRETVKEIGYDSEEKGLDYKTMDVIIKLEQQSNQIAGCVHVDKNVEDIGAGDQGMMFGYATNETKELMPLTHVLATSITRELDYIRMKGVSSRV--GWLRPDGKAQVTVEYNCKHGVLIPKRIHTILVSVQHDENIENEEIREFVLENVIKKVCPSDLMDKETRILINPSGRFTIGGPAADAGLTGRKIIVDTYGGWGAHGGGAFSGKDATKVDRSGAYMARLVAKSIVFSGLCSRCLVQVSYGIGIARPLSLYINTFGTAKDGYNDTKLLEIVNKVFDFRPGILIKQLNLKSPIFKKTSSGGHFGRSEKE---FLWEKPIILQ------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ODJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160363 for 3141 contacts (-51.1/contact) +
2D Compatibility (PS) -37568 + (NN) -10933 + (LL) 1412
1D Compatibility (HY) -34800 + (ID) 8950
Total energy: -251202.0 ( -79.98 by residue)
QMean score : 0.440
|
|
|