Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKTTKNLLITEINKILPEDSQNR-LISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLN--EGSNK-RCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALY---NYGVNLGLIFQAKDDIRDYKQDEV--NNLMSML----SKSEIENYIDNLFKQALDNLGELSGDTNYLYNLLNQVKRDD |
| 2FOR Chain:A ((46-318)) | ----------------IAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALD-------------LDAE---------------------GKHVPLDALERIHRHKTGALIRAAVRLGAL--SAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVG---GKSTYPALLGLEQARKKARDLIDDA-RQALKQLAEQSLDTSALEALADYIIQRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141501 for 2003 contacts (-70.6/contact) +
2D Compatibility (PS) -25889 + (NN) -10880 + (LL) 4048
1D Compatibility (HY) -15200 + (ID) 5650
Total energy: -195072.0 ( -97.39 by residue)
QMean score : 0.519
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