Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLPATPDNSTAVAIIPIAAILGIIPIATSVAPIAPNNNAKPIVHPPEKVLEGCCFC----EEIMLVYYKTVARCFVFCANYY---------------YFHHLQTFFEMELYYL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4BS9 Chain:A ((3-781)) | PTALQIKPHFHVEIIEPKQVYLLGEQGNHALTGQLYCQILPFLNGEYTREQIVEKLDGQVPEEYIDFVLSRLVEKGYLTEVAPELSLEVAAFWSELGIAPSVVAEGLKQPVTVTTAGKGIREGIVANLAAALEEAGIQVSDPTAQLQVVLTDDYLQPELAAINKEALERQQPWLLVKPVGSILWLGPLFVPGETGCWHCLAQRLQGNREVEASVLQQKRALQERPTARATLPSTLQTGLQWAATEIAKWMVKRHLNAIAPGTARFPTLAGKIFTFNQTTLELKAHPLSRRPQCPTCGDRETLQRRGFEPLKLESRPKHPEQTVQKYQHLIGPITGVVTELVRSRASGLCEAIERYSGIFQGDEPRKRATLAELGDLAIHPEQCLHFSDRQYDNRESSNERATVTHDWIPQRFDASKAHDWTPVWSLTEQTHKYLPTALCYYRYPFPPEHRFCRSDSNGNAAGNTLEEAILQGFMELVERDSVCLWWYNRVSRPAVDLSSFDEPYFLQLQQFYQTQNRDLWVLDLTADLGIPAFVGVSNRKAGSSERIILGFGAHLDPTVAILRALTEVNQIGLELDATDWLVNATLAASPYLVADASQPLKTAKDYPRRWSDDIYTDVMTCVEIAKQAGLETLVLDQTRPDIGLNVVKVIVPGMRFWSRFGSGRLYDVPVKLGWREQPLAEAQMNPTPMPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15178 for 442 contacts (-34.3/contact) +
2D Compatibility (PS) -10233 + (NN) -8653 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 1000
Total energy: -33864.0 ( -76.62 by residue)
QMean score : 0.109
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