Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MITLDGRLVAHKHINVNKGELAHRHSTLAGGKPVLCPVLKVEKGKITYIGNNSEHYKPALANLYNAVKN------------------------------------------------------------------------------------------------------------------------------- |
4YZS Chain:A ((6-302)) | SLVIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSSLKMIIPSLDGALFQWDRDRESMETVPFTVESLLESVVLVGGKSLTTYGLSAYSGKVRYICSALGCRQLLLQRTQKTVRAVGPRSGNEKWNFSVGHFELRYKVSVADWKVMEWEYQFCTPIASAWLLKDGKVIPISIVEAARGATENSVYLGMYRGQLYLQSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2677 for 311 contacts (-8.6/contact) +
2D Compatibility (PS) -7605 + (NN) -2241 + (LL) 0
1D Compatibility (HY) -400 + (ID) 550
Total energy: -13473.0 ( -43.32 by residue)
QMean score : 0.203
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