Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDAEAKLKVKLSKRYIPPGNPGGTNFYEDEDFAESYKLYEKRRELLKKKKLQDQTNININKEKLAKKLKEKKIANLDSELSDTEACVINDEEDAMVNQHGINIARLKGAIFIDQGPISQREDEQHESERQEGKKATLTREKKVSPINVTIKDTRSKRTCSHDSIVDLNNVSSNGSDSFGSAADAVN |
| 2K8J Chain:X ((1-29)) | -----------------------------RLVPGAAYALYGVWPLLLLLLALPPRAYA--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9398 for 104 contacts (90.4/contact) +
2D Compatibility (PS) -3186 + (NN) -3282 + (LL) 8336
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 9366.0 ( 90.06 by residue)
QMean score : 0.654
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