Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKKDYYKLLGVDRNASTDEIKKAYKKLALKYHPDRN--PGNKEAEEKFKEITAAYEVLSDSEKRAGYDRYGHEGASGGFDFSQGFGSAGDFSDIFNDFFGGEFGSSSRSKAKRSTTGVPGADLRYDLEITLEDAFKGIQAPIHYVTNVKCDMCQGRGSEGATKPVQCHTCQGSGRIRTQQGFFTIERTCTTCYGEGEIIQNKCKKCNGSGRRRDEVNISVSIPKGIEEGAKVRVSGKGEAGAKGGKSGDLYVYVKITPHKIFTRNKADLHCKVPIRMTLAVLGGEIDVQSIDGAKIKVKVPEGTQTSTKLRCKEKGMPYMNSYARGDLYVQIIVETLNPNNLTKKQIELLKALEEEENASIQQQSEGFFSKVKKK
2CUG Chain:A ((18-88))----DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPG---AEDRFIQISKAYEILSNEEKRTNYDHYGSGPSSG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2CUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -15221 for 407 contacts (-37.4/contact) +
2D Compatibility (PS) -7871 + (NN) -6850 + (LL) 15492
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -21700.0 ( -53.32 by residue)
QMean score : 0.772

(partial model without unconserved sides chains):
PDB file : Tito_2CUG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CUG-query.scw
PDB file : Tito_Scwrl_2CUG.pdb: