Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MLVCMCFK-VLKTLKIGCTEKPHLLKL
1G2Y Chain:B ((1-30))
MVSKLSQLQTEMLAALLESGLSKEALIQAL
General information:
TITO was launched using:
RESULT:
Template:
1G2Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1204 for 88 contacts (-13.7/contact) +
2D Compatibility (PS) -2493 + (NN) -1310 + (LL) 0
1D Compatibility (HY) 4000 + (ID) 100
Total energy: -1107.0 ( -12.58 by residue)
QMean score : -0.118
(partial model without unconserved sides chains):
PDB file :
Tito_1G2Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2Y-query.scw
PDB file :
Tito_Scwrl_1G2Y.pdb
: