Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIVNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTERHGYIVDVSKRIPF |
3NYB Chain:A ((34-88)) | ------PSREEIEIRNQTISTIREAVKQLWP--DADLHVFGSYSTDLYLPGSDIDCVVTSELG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12973 for 283 contacts (-45.8/contact) +
2D Compatibility (PS) -6065 + (NN) -5121 + (LL) 14584
1D Compatibility (HY) -800 + (ID) 600
Total energy: -10975.0 ( -38.78 by residue)
QMean score : 0.459
|
|
|