Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQVIGYLRQSTMKQ---QSLAAQKQAIEAIAEKH-HIQHINFYSD-KQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSIYEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA |
3G13 Chain:A ((6-160)) | -LRVAAYCRVSTDSEDQLNSYKSQVQYYTDMIKKNKEWVLADIYADEA-----TKREDFQRMINDCMNGEIDMVFTKSISRFARNTLDTLKYVRMLKERNIAVYFEDEK-INTLTMDGELLLVVLSSVAQQEVENISANVKKGLKMKMKRGELVGF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G13.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72554 for 958 contacts (-75.7/contact) +
2D Compatibility (PS) -15649 + (NN) -7429 + (LL) 21436
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -85446.0 ( -89.19 by residue)
QMean score : 0.505
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