Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MSIVLFLIVFI---LLSLIVSRYLYSVALN-VPSKIDVVFNPIEKLIYQLIGTKLEHMSGKTYIKHFLLFNGLMGGLSFVLLLIQQWLFL-------NPNHNLNQSVSLAFN--TMASFLTNTNLQHYAGETDLSYLTQMCVITFLMFTSAASGYAVCIAMLRRLTGMTDVIGNFYQDITRFIVRVLIPFALIISLFLISQGTPQTLKGNLVIETLS-GVKQTIAYGPMASLESIKHLGTNGGGFLGANSSTPFENPTYWSNYAE-----ALSMMLIPGSLVFLFGRMLKTKLQIHPHA-IMIFVAMFVMFIGFLVTCLYFEFAGNPVLHHLGIAGGN-MEGKETRFG--IGLSALFTTITTAFTTGTVNNMHDSLTPLGGMV-PMVLM-MLNAVFGGEGVGLMNMLIYVMLTVFICSL-MIGKTPSYLGMKIEGKEMKLIALSFLVHPLLILVFSALAFIV-PGASDALTNPQFHGVSQVLYEFTSSSANNGSGFEGLGDNTVFWNISTGIVMLLARYIPIVLQILIVSSLVNKK-TYQQHT-QDVPINNLFFSSVLIIFIILLSGLTFLPDLML-GPIGEQLLLHA |
| 4OO2 Chain:A ((18-527)) | TRPLTGEEYLESLRDAREVYLDGSRVKDVTAHPAFHNPARMTARLYDSLHDPAQKAVLTAPTD-----AGDGFTHRFFTAPRSVDDLVKDQAAIASWARKSYGWMGRSPDYKASFLGTLGANADFYEPFADNARRWYRESQEKVLYWNHA----FLHPPVDRSEVGDVFIHVERETDAGLVVSGAKVVATG--------SALTHAAFISHWGLPIKDRKFALVATVPMDA------------DGLKVICRPSYSANAATTGSPFDNP-LSSRLDENDAILVLDQVLIPWENVFVYGNLGKVHLLAGQSGMI-----ERATFHGCTRLAVKLEFIAGLLAKALDITGAKDFRGVQTRLGEVLAWRNLFWSLSDAAARNPVPWKNGTLLPNPQAGMAYRWFMQ---------IGYPRVLEIVQQDV-ASGLMYVNSSTEDFRNPETGPYLEKYLRGSDGAG------AVERVKVMKLLWDAVGS--DFGGRHELYERNYSGNHENTRIELLLSQTA-------------------------SGKLDSYMDFAQACMDEYDLDGWTAPD--------------LESFHAMRSASRDLLGGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -321424 for 3613 contacts (-89.0/contact) +
2D Compatibility (PS) -46874 + (NN) 4619 + (LL) 10192
1D Compatibility (HY) 2000 + (ID) 4300
Total energy: -355787.0 ( -98.47 by residue)
QMean score : 0.142
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