Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MSVLKWVSSYNNER-----DAWF----VLYPPSKASSCFTL---IVDVALFSE
1LX8 Chain:A ((1-55))
MYLTLQEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDLNRP
General information:
TITO was launched using:
RESULT:
Template:
1LX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18827 for 187 contacts (-100.7/contact) +
2D Compatibility (PS) -4479 + (NN) -3102 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -28858.0 ( -154.32 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1LX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LX8-query.scw
PDB file :
Tito_Scwrl_1LX8.pdb
: