Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKENFWSELPRPFFILAPMED--------VTDIVFRHVVSE-AARPDVFFTEFTNTESFCH--PEG-----IHSV--RGRL--TFSEDEHPMVAHIWG-----------------------DKP----------------------EQFRETSIQLAKMGFKGIDLNMGC---------PVANVAKKGKGSGLILRPDVAAEIIQATKAG---GLPVSVKTRLGYY-----EIDEWKDWLKHVFEQDIANLSIHLRTRKEMS----KVDAHWELIEAIKNLRDEIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL |
| 3HGJ Chain:A ((10-335)) | ----LGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKAL------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81799 for 1966 contacts (-41.6/contact) +
2D Compatibility (PS) -26058 + (NN) -12597 + (LL) 7972
1D Compatibility (HY) -3600 + (ID) 2050
Total energy: -118132.0 ( -60.09 by residue)
QMean score : 0.415
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