Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKDVHDLFLNHVNS--NAVKTRKMMGEYIIYYDSVVIGGLY--DN--RLLVKATKSVRHQLQDNTLVSPYPGAKEMILIPD--ITEAINLTNLFELIKNDLKN
2OC6 Chain:A ((18-115))
----RERTEEVLTWIKNKYPNLHTEIKWNQPMFTDHGTFIIGFSVSKKHLAVAPEKV--TIAHVEDDIVKAGYDYTEQLIRIPWNGPVDYTLLEKMIEFNILDK--
General information:
TITO was launched using:
RESULT:
Template:
2OC6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47494 for 580 contacts (-81.9/contact) +
2D Compatibility (PS) -9586 + (NN) -3658 + (LL) 488
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -62450.0 ( -107.67 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_2OC6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OC6-query.scw
PDB file :
Tito_Scwrl_2OC6.pdb
: