Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------MNDMLISLVIPVFALLVIGGIIWVIIEGIVHISKKNKAIDNFLNQVNKVSETYKFATAFLFLILATAGISQFYLYYIVSAFLFWLVI----LTFGIAGIIFLMPYGLCFLPLYKQKKKKQ---TFKKYMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLIVAKKATNKNKEIETVDNTNITER----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3JA7 Chain:A ((1-447)) | NWISELIDTYRNLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSK----FSPKIKNMMLDEFSDVLNHLSFQRKGSDHFRRWYVDSRIFFHKIIDPKRPKEGIKELRRLDPRQVQYVYFIYDTAHESYACDGRMYEAGTKIKIP---KAAVVYAHSGLVDCCGKNIIGYL------HRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVYDASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPGADNTGNMEDIRWFRQALYMALRVPLSRIPQDQQGGVMFDSGTSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFAELKEAEILERRINMLTMAEPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEESKEARFQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120179 for 1016 contacts (-118.3/contact) +
2D Compatibility (PS) -19718 + (NN) 1359 + (LL) 1012
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -143476.0 ( -141.22 by residue)
QMean score : 0.038
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