Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------------MICSQTLFRYPTHMIFLMKHNYMIDCIILLNNLLQTCHFTLKIYIISDDILQVIYK---------------------------------------------------------
2B99 Chain:A ((2-147))
TKKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLEEEGC-DIVMALGMPGKAEKDKVCAHEASLGLMLAQLMTNKHIIEVFVHEDEAKDDKELDWLAKRRAEEHAENVYYLLFKPEYLTRMAGKGLRQG
General information:
TITO was launched using:
RESULT:
Template:
2B99.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36947 for 322 contacts (-114.7/contact) +
2D Compatibility (PS) -5685 + (NN) 622 + (LL) 204
1D Compatibility (HY) 1600 + (ID) 250
Total energy: -40456.0 ( -125.64 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_2B99.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B99-query.scw
PDB file :
Tito_Scwrl_2B99.pdb
: