Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MLLKPKYQI----VIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNP--IASPGLFGVNAGAVF----FVIFSIT---FIQIQSFKMIVVIAFLGAIV--------VTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGIL---------IMNETDLQGLLFWLS--GSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIAT-GLGQNIKLIKWMIIMLISMLAGISVAVAGSIV----------FVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL |
| 1EI1 Chain:A ((1-391)) | SNSSDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLDSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -365399 for 2631 contacts (-138.9/contact) +
2D Compatibility (PS) -35222 + (NN) -4460 + (LL) 0
1D Compatibility (HY) 2800 + (ID) 2250
Total energy: -404531.0 ( -153.76 by residue)
QMean score : 0.152
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