Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISI-------MDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
| 1OMO Chain:B ((21-320)) | ------------------------MNAVEEAFRLYALGKAQMPPKVYL--EFEKGDLR----AMPAHLMG---YAGLKWVNSHPGNPDK-GLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCGTQAYFQLEALRRVFD-IGEVKAYDVREKAAKKFVSYCEDR----GISASVQPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVE---ILKKAKIVVDDLEQA-KHGGEINVAVSKGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDSTGLAIQDVAVAKVVYENALSKNVGSKIKFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165256 for 2520 contacts (-65.6/contact) +
2D Compatibility (PS) -31701 + (NN) -14091 + (LL) 3104
1D Compatibility (HY) -19200 + (ID) 5150
Total energy: -232294.0 ( -92.18 by residue)
QMean score : 0.509
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