Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFYNILGVLILVMLSTDALDCDIITHLRTSLINFLPIQSLLSALKNPYC
3J47 Chain:O ((1-28))
---------------------GDQITKMKDRLVEWNDQVEKLGKKMEAR-
General information:
TITO was launched using:
RESULT:
Template:
3J47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4737 for 104 contacts (-45.5/contact) +
2D Compatibility (PS) -3002 + (NN) -1496 + (LL) 2340
1D Compatibility (HY) 400 + (ID) 250
Total energy: -6745.0 ( -64.86 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_3J47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J47-query.scw
PDB file :
Tito_Scwrl_3J47.pdb
: