Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------MKKLQLKKWKCRENDIEAVHNNKGYAYQRKLDALEEVRKGYYP----IKRAIDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSSEVIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEGSR---------------------------------------- |
| 4O5J Chain:A ((27-400)) | LKNLNEKYEQLSQYLNQVASLKQSIQNANNIELVNSSLNYLKSFTNNNYNSTTQSPIFNAVQAVITSVLGFWSLYAGNYFTFFVGKKVDSGQPASVQGNPPFKTIIENCSGIENCAMDQTTYDKMKKLAEDLQAAQTNSATK-GNNLCALSGCAATSNPPNSTVSNALNLAQQLMDLIANTKTAMMWKN-IVISGVSNTSGAITSTNYPTQYAVFNNIKAMIPILQQAVTLSQSNHTLSASLQAQATGSQTNPKFAKDIYTFAQNQKQV--ISYAQDIFNLFNS--IPAEQYKYLEK----------AYLKIPNAGSTPTNPY----RQVVNLNQEVQTIKNNVSYYGNRVDAALSVARDVYNLKSNQAEIVTAYNDAKTLSEEISKLPH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34566 for 1305 contacts (-26.5/contact) +
2D Compatibility (PS) -21748 + (NN) -2479 + (LL) 836
1D Compatibility (HY) -400 + (ID) 1600
Total energy: -59957.0 ( -45.94 by residue)
QMean score : 0.129
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